| P1/P2 | 968f-U1401r | |||||||||||
| Samples | OL-KR40/385m | OL-KR49/532m | OL-KR40/609m | ONK-PVA3/83m | OL-KR43/96m | OL-KR42/175m | ||||||
| Method | HTP | DGGE | HTP | DGGE | HTP | DGGE | Cloning | DGGE | Cloning | DGGE | Cloning | DGGE |
| Sequences | 2781 | 228 | 8449 | |||||||||
| Number of clones | 88 | 90 | 65 | |||||||||
| Number of DGGE bands | 17 | 19 | 20 | 13 | 7 | 15 | ||||||
| Number of sequenced DGGE bands | 6 | 11 | 9 | 2 | 2 | 2 | ||||||
| Number of OTUs | 60 | 12 | 216 | 45 | 36 | 23 | ||||||
| Chao | 90 | 18 | 407 | 70 | 62.3 | 49 | ||||||
| ACE | 104 | 16 | 567 | 78 | 115 | 79 | ||||||
| Jackknife | 109 | 21 | 492 | 72 | 60 | 597 | ||||||
| Shannon | 1.13 | 1.1 | 2.6 | 3.6 | 3.2 | 2.7 | ||||||
| Simpson | 0.62 | 0.25 | 0.14 | 0.024 | 0.05 | 0.08 | ||||||
| Estimated coverage of communities (Chao) | 67% | 32%* | 67% | 56%* | 53 % | 47%* | 64% | 40%* | 58% | 60%* | 47% | 22%* |